NAME¶

Honey - genomic structural variation discovery

SYNOPSIS¶

Honey {subcommand}[options]

DESCRIPTION¶

PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.

OPTIONS¶

For a complete description, see the help menu

-h, --help

Show summary of options.

SEE ALSO¶

blasr(1) /usr/share/doc/pbhoney/HoneyReadme.txt