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GT-COMPREADS-REFDE(1) | GenomeTools Manual | GT-COMPREADS-REFDE(1) |
NAME¶
gt-compreads-refdecompress - Decodes a given RCR (Reference Compressed Reads).SYNOPSIS¶
gt compreads refdecompress [option ...] (-file file)DESCRIPTION¶
-v [yes|no]be verbose (default: no)
-qnames [yes|no]
decode read names, default is to just number them
(default: no)
-ref [string]
Index file (generated by the gt encseq tool) for
reference genome. (default: undefined)
-rcr [string]
specify base name of file containing RCR. (default:
undefined)
-name [string]
specify base name for decoded RCR (suffix will be
".rcr.decoded") (default: undefined)
-help
display help and exit
-version
display version information and exit
REPORTING BUGS¶
Report bugs to <gt-users@genometools.org>.07/29/2016 | GenomeTools 1.5.9 |