.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.38.4.
.TH FIGTREE "1" "February 2011" "figtree " "User Commands"
.SH NAME
figtree \- graphical phylogenetic tree viewer
.SH DESCRIPTION
Figtree is a (phylogenetic) tree figure drawing tool.
It is designed as a graphical viewer of phylogenetic trees and as
a program for producing publication-ready figures.  In particular it is
designed to display summarized and annotated trees produced by BEAST.
.SH AUTHOR
Andrew Rambaut
.P
Institute of Evolutionary Biology
.P
University of Edinburgh
.P
a.rambaut@ed.ac.uk
.P
http://tree.bio.ed.ac.uk/
.IP
Uses the Java Evolutionary Biology Library (JEBL)
.IP
http://jebl.sourceforge.net/
.IP
Thanks to Alexei Drummond, Joseph Heled, Philippe Lemey,
.IP
Tulio de Oliveira, Beth Shapiro & Marc Suchard
.IP
Usage: figtree [\-graphic <PDF|SVG|SWF|PS|EMF|GIF>] [\-width <i>] [\-height <i>] [\-help] [<tree\-file\-name>] [<graphic\-file\-name>]
.HP
\fB\-graphic\fR produce a graphic with the given format
.HP
\fB\-width\fR the width of the graphic in pixels
.HP
\fB\-height\fR the height of the graphic in pixels
.HP
\fB\-help\fR option to print this message
.IP
Example: figtree test.tree
Example: figtree \fB\-graphic\fR PDF test.tree test.pdf
Example: figtree \fB\-graphic\fR GIF \fB\-width\fR 320 \fB\-height\fR 320 test.tree test.gif
.PP
Unrecognized argument: \fB\-\-version\fR
.IP
FigTree v1.3.1, 2006\-2009
.IP
Tree Figure Drawing Tool
.IP
Andrew Rambaut
.IP
Institute of Evolutionary Biology
.IP
University of Edinburgh
.IP
a.rambaut@ed.ac.uk
.IP
http://tree.bio.ed.ac.uk/
.IP
Uses the Java Evolutionary Biology Library (JEBL)
.IP
http://jebl.sourceforge.net/
.IP
Thanks to Alexei Drummond, Joseph Heled, Philippe Lemey,
.IP
Tulio de Oliveira, Beth Shapiro & Marc Suchard
.IP
Usage: figtree [\-graphic <PDF|SVG|SWF|PS|EMF|GIF>] [\-width <i>] [\-height <i>] [\-help] [<tree\-file\-name>] [<graphic\-file\-name>]
.HP
\fB\-graphic\fR produce a graphic with the given format
.HP
\fB\-width\fR the width of the graphic in pixels
.HP
\fB\-height\fR the height of the graphic in pixels
.HP
\fB\-help\fR option to print this message
.IP
Example: figtree test.tree
Example: figtree \fB\-graphic\fR PDF test.tree test.pdf
Example: figtree \fB\-graphic\fR GIF \fB\-width\fR 320 \fB\-height\fR 320 test.tree test.gif
.SH "SEE ALSO"
The full documentation for
.B figtree
is maintained as a Texinfo manual.  If the
.B info
and
.B figtree
programs are properly installed at your site, the command
.IP
.B info figtree
.PP
should give you access to the complete manual.