tree_recon - Tree reconstruction
tree_recon [OPTIONS] -m IN.DIST
Reconstruct phylogenetic tree from Phylip matrix IN.DIST.
Input / Output:¶
- -b, --build STRING
- Tree building method. nj: neighbour-joining, min: UPGMA single linkage, max: UPGMA complete linkage, avg: UPGMA average linkage, wavg: UPGMA weighted average linkage. Neighbour-joining creates an unrooted tree. We root that tree at the least joined pair. One of nj, min, max, avg, and wavg. Default: nj.
CONTACT AND REFERENCES¶
|tree_recon 1.4.7 [tarball]|