NAME¶

gbf2xml - Convert GenBank flatfiles to INSDSeq XML

SYNOPSIS¶

gbf2xml

DESCRIPTION¶

gbf2xml reads the specified GenBank flatfile (or from standard input when not passed a filename) and writes a corresponding INSDSeq XML document to standard output.

BUGS¶

Feature intervals that refer to 'far' locations, i.e., those not within the cited record and which have an accession and colon, are suppressed. Those rare features (e.g., trans-splicing between molecules) are lost.

Keywords and References are currently not supported.

SEE ALSO¶

asn2ff(1), asn2gb(1), xtract(1).