.TH mia\-2dmyoseries\-compdice 1 "v2.4.7"  "USER COMMANDS"
.SH NAME
mia\-2dmyoseries\-compdice
\- Evaluate the dice index between segmentations.
.SH SYNOPSIS
.B  mia\-2dmyoseries\-compdice \-1 <first> \-2 <second> [options]
.SH DESCRIPTION
.B mia\-2dmyoseries\-compdice
This program is used to evaluate the per-frame dice index of segmented regions of two image series
.SH OPTIONS
.RS
.IP "\-1 \-\-first=(input, required); string"
first segmentation set

.IP "\-2 \-\-second=(input, required); string"
second segmentation set

.IP "\-k \-\-skip=2"
images to skip atthe begin of the series

.RE
.SS Help & Info
.RS
.IP "\-V \-\-verbose=warning"
verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:

.RS 10
.I
trace
\(hy Function call trace
.RE
.RS 10
.I
debug
\(hy Debug output
.RE
.RS 10
.I
info
\(hy Low level messages
.RE
.RS 10
.I
message
\(hy Normal messages
.RE
.RS 10
.I
warning
\(hy Warnings
.RE
.RS 10
.I
fail
\(hy Report test failures
.RE
.RS 10
.I
error
\(hy Report errors
.RE
.RS 10
.I
fatal
\(hy Report only fatal errors
.RE
.IP "   \-\-copyright"
print copyright information

.IP "\-h \-\-help"
print this help

.IP "\-? \-\-usage"
print a short help

.IP "   \-\-version"
print the version number and exit

.RE
.SS Processing
.RS
.IP "   \-\-threads=\-1"
Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (\-1: automatic estimation).

.RE
.SH EXAMPLE
Evaluate the per\-frame dice index of the segmentations of set segment.set with respect to the segmentation set reference.set skipping two images at the beginning.
.HP
mia\-2dmyoseries\-compdice \-i segment.set \-r reference.set \-k 2
.SH AUTHOR(s)
Gert Wollny
.SH COPYRIGHT
This software is Copyright (c) 1999\(hy2015 Leipzig, Germany and Madrid, Spain.
It comes  with  ABSOLUTELY  NO WARRANTY  and  you  may redistribute it under the terms of the GNU 
GENERAL PUBLIC LICENSE Version 3 (or later). For more 
information run the program with the option '\-\-copyright'.