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.TH "bp-analyze" "1" "Feb 2018" "" ""
.hy
.SH NAME
.PP
\f[B]bp-analyze\f[R] - Generate an HTML report summarizing bali-phy
runs.
.SH SYNOPSIS
.PP
\f[B]bp-analyze\f[R] [OPTIONS] \f[I]directory1\f[R]
[\f[I]directory2\f[R] ...
]
.SH DESCRIPTION
.PP
Generate an HTML report summarizing bali-phy runs.
.PP
The report is created at \f[B]Reports/index.html\f[R].
.PP
A log of all sub-commands is created at
\f[B]Reports/bp-analyze.log\f[R].
.SH OPTIONS:
.TP
\f[B]-h\f[R], \f[B]--help\f[R]
Print usage information.
.TP
\f[B]--skip=NUM\f[R]
Skip NUM iterations as burnin
.TP
\f[B]--subsample=NUM\f[R]
Keep only ever NUM iterations
.SH REPORTING BUGS:
.PP
See \f[B]Reports/bp-analyze.log\f[R] to check if any sub-commands
failed.
.PP
BAli-Phy online help: <http://www.bali-phy.org/docs.php>.
.PP
Please send bug reports to <bali-phy-users@googlegroups.com>.
.SH AUTHORS
Benjamin Redelings.