table of contents
other versions
- buster 0.999+ds-1
PXSTREC(1) | User Commands | PXSTREC(1) |
NAME¶
pxstrec - This will conduct state reconstruction analyses.SYNOPSIS¶
pxstrec [OPTION]... [FILE]...DESCRIPTION¶
This will conduct state reconstruction analyses.- -d, --dataf=FILE
- input data file
- -w, --datawide
- data is in wide format so (001 instead of 2)
- -z, --dataz
- data is in probability format (0,1,0,0)
- -t, --treef=FILE
- input tree file
- -c, --conf=FILE
- configuration file
- -o, --outanc=FILE
- output file for ancestral calc
-n, --outstnum=FILE output file for stochastic mapping number
-a, --outstnumany=FILE output file for stochastic mapping number any
-m, --outsttim=FILE output file for stochastic mapping duration
- -p, --periods=NUMS
- comma separated times
- -l, --logf=FILE
- log file, stout otherwise
- -h, --help
- display this help and exit
- -V, --version
- display version and exit
REPORTING BUGS¶
Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>AUTHOR¶
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.May 2018 | pxstrec 0.99+ds |