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PXRLS(1) User Commands PXRLS(1)

NAME

pxrls - Taxon relabelling for alignments.

SYNOPSIS

pxrls [OPTION]...

DESCRIPTION

Taxon relabelling for alignments. This will take fasta, phylip or nexus file formats Two ordered lists of taxa, -c (current) and -n (new) must be provided.
-s, --seqf=FILE
input seq file, stdin otherwise
-c, --cnames=FILE
file containing current taxon labels (one per line)
-n, --nnames=FILE
file containing new taxon labels (one per line)
-o, --outf=FILE
output file, stout otherwise
-h, --help
display this help and exit
-V, --version
display version and exit

REPORTING BUGS

Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.
May 2018 pxrls 0.99+ds