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MAQINDEX(1) User Commands MAQINDEX(1)

NAME

maqindex - maqview indexing

SYNOPSIS

maqindex <-i|-v|-b> [-l level] [-c cns] <in.map> [chr[:begin[-end]] [...]]

OPTIONS

-l INT
level for indexing [1024]
-c STR
.cns file for this .map file
-i
index the map file
-v
display the alignment in the mapview format
-b
dump in the .map format

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.
December 2015 maqindex 0.2.5