.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.8. .TH FASTQ-INTERLEAVE "1" "January 2019" "fastq-interleave 963" "User Commands" .SH NAME fastq-interleave \- Read 2 fastq files, and write them interleaved .SH SYNOPSIS .B fastq-interleave \fI\,x.fastq y.fastq\/\fR .br .B fastq-interleave \fI\,x.fastq.gz y.fastq.gz\/\fR .SH DESCRIPTION Read 2 fastq files, and write them interleaved. Keep just the first word of header lines, and append "/1" and "/2" if they are otherwise identical. Assumes 1 fastq per 4 lines, i.e. no line wrapping.