PROPHET(1e) | EMBOSS Manual for Debian | PROPHET(1e) |
NAME¶
prophet - Scan one or more sequences with a Gribskov or Henikoff profileSYNOPSIS¶
prophet -sequence seqall -infile infile -gapopen float -gapextend float -outfile align
prophet -help
DESCRIPTION¶
prophet is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Profiles,Protein:Profiles" command group(s).OPTIONS¶
Input section¶
-sequence seqall-infile infile
Required section¶
-gapopen floatDefault value: 1.0
-gapextend float
Default value: 1.0
Output section¶
-outfile alignBUGS¶
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).SEE ALSO¶
prophet is fully documented via the tfm(1) system.AUTHOR¶
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>Wrote the script used to autogenerate this manual
page.
COPYRIGHT¶
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
05/11/2012 | EMBOSS 6.4.0 |