ONTOCOUNT(1e) | EMBOSS Manual for Debian | ONTOCOUNT(1e) |
NAME¶
ontocount - Count ontology term(s)SYNOPSIS¶
ontocount -oboterms obo -subclasses boolean -obsolete boolean -outfile outfile
ontocount -help
DESCRIPTION¶
ontocount is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Ontology" command group(s).OPTIONS¶
Input section¶
-oboterms oboAdditional section¶
Advanced section¶
-subclasses booleanExtend the query matches to include all terms which are
specialisations (sub-classes) of the matched terms. Default value: N
-obsolete boolean
The default behaviour is to not use or return obsolete
terms. This option if set will include all terms. Default value: N
Output section¶
-outfile outfileDefault value: stdout
BUGS¶
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).SEE ALSO¶
ontocount is fully documented via the tfm(1) system.AUTHOR¶
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>Wrote the script used to autogenerate this manual
page.
COPYRIGHT¶
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
05/11/2012 | EMBOSS 6.4.0 |