table of contents
cif_values() | cif_values() |
NAME¶
cif_values - Read CIFs and print out requested tag values in a tabular form.SYNOPSIS¶
cif_values --options input1.cif input*.cifDESCRIPTION¶
Read CIFs and print out requested tag values in a tabular form.OPTIONS¶
-t, --tags _tag1,_tag2,_tag3--tags "_tag1 _tag2 _tag3" Print out values of tags _tag1, _tag2, and _tag3; the specified tag list becomes a new list of printed tags.
-a, --add-tag _tag4 Add tag _tag4 to the list of printed tags.
-c, --clear-tags Clear the list of printed tags accumulated so far.
-h, --header Print out header with the names of selected tags at the beginning (default).
-h-, --no-header Do not print out any header.
-r, --replace-spaces Replace spaces into underscores (default).
-r-, --dont-replace-spaces, --no-replace-spaces Do not replace spaces into underscores (works satisfactory only when tabs are used as separators).
-s, --separator=", " Use the specified string as a separator between tag values on a line.
-u, --uniquify-tags _tag1,_tag2 Print only unique values of specified tags, not the whole list of values.
--add-uniquified-tag _tag1 Add tag '_tag' to the uniquified tag list.
-u-, --dont-uniquify-tags, --no-uniquify-tags Print all values of all tags, do not uniquify any tags (default).
--tab-separator Use TAB character as a separator between tag values on a line (default).
--vseparator, --value-separator ',' Use the specified string to separate multiple values of a given tag (default ',').
--treat-dots-as-underscores Convert all dots in tag names into underscores (default).
--dont-treat-dots-as-underscores, --no-treat-dots-as-underscores Leave original tags as they are.
--filename Print out full filename at the beginning of each line.
--fix-syntax-errors Try to fix those syntax errors in input CIFs that can be corrected unambiguously.
--no-fix-syntax-errors,
--dont-fix-syntax-errors Do not try to fix syntax errors in input CIFs (default).
--basename Print out basename of each file at the beginning of each line.
--no-filename Do not print file names (default).
--dataname Print out data block name at the beginning of each line (default).
--no-dataname Do not print data block names.
--use-perl-parser
--use-c-parser Specify parser to parse CIF files. C parser is default.
--help, --usage Output a short usage message (this message) and exit.
--version Output version information and exit.