Scroll to navigation

cif_split() cif_split()

NAME

cif_split - Split CIF files into separate files with one data_ section each. This script parses given CIF files to separate the data blocks, so is capable of splitting non-correctly formatted and nested CIF files.

SYNOPSIS

cif_split --options input1.cif input*.cif

DESCRIPTION

Split CIF files into separate files with one data_ section each.

This script parses given CIF files to separate the data blocks, so is capable of splitting non-correctly formatted and nested CIF files.

OPTIONS

-o, --output-dir out/ Put all split files into the directory out/.

-p, --prefixed, --output-prefixed Print split data blocks to the STDOUT, each line prefixed by the data block name. Do not create any files.

--output-tar Produce TAR archive with split files to the STDOUT.

-h, --add-cif-header header_file.cif Prepend each of the output files with the comments from the beginning of the specified file.

--split-global-data-block Put the 'data_global' data block (if any) to each split file. Default option.

--do-not-split-global-data-block,

--dont-split-global-data-block,

--no-split-global-data-block Do not treat 'data_global' data block (if any) as special.

-v, --verbose Print names of the generated files to STDERR.

-q, --quiet Do not print file names to STDERR.

--use-perl-parser Use Perl parser for CIF parsing.

--use-c-parser Use Perl & C parser for CIF parsing.

--cif-input Use CIF format for input (default).

--json-input Use JSON format for input.

--cif-output Use CIF format for output (default).

--json-output Use JSON format for output.

--cif Use CIF format for both input and output (default).

--json Use JSON format for both input and output.

--help, --usage Output a short usage message (this message) and exit.

--version Output version information and exit.

REPORTING BUGS

Report cif_split bugs using e-mail: cod-bugs@ibt.lt