table of contents
- buster 1.5.10+ds-3
- buster-backports 1.6.1+ds-3~bpo10+1
- testing 1.6.1+ds-3
- unstable 1.6.1+ds-3
- experimental 1.6.2+ds-1
GT(1) | GenomeTools Manual | GT(1) |
NAME¶
gt - The GenomeTools genome analysis system.SYNOPSIS¶
gt [option ...] [tool | script] [argument ...]DESCRIPTION¶
-i [yes|no]-q [yes|no]
-test [yes|no]
-seed [value]
-help
-version
Tools:
Set the environment variable GT_MEM_BOOKKEEPING=on to enable memory bookkeeping (e.g., like this: env GT_MEM_BOOKKEEPING=on gt).
Set the environment variable GT_ENV_OPTIONS=-spacepeak to show a spacepeak after program run. Set the environment variable GT_ENV_OPTIONS=-showtime to show processing times for some program parts if implemented.
Set the environment variable GT_SEED to an integer value to supply a seed for the random number generator. Can be overridden by the -seed option.
Combinations are possible. Running the gt binary with GT_ENV_OPTIONS=-help shows all possible "environment options".
REPORTING BUGS¶
Report bugs to https://github.com/genometools/genometools/issues.07/29/2020 | GenomeTools 1.6.1 |