.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.44.1.
.TH PROKKA-GENPEPT_TO_FASTA_DB "1" "February 2015" "prokka-genpept_to_fasta_db 1.11" "User Commands"
.SH NAME
prokka-genpept_to_fasta_db \- rapid annotation of prokaryotic genomes
.SH SYNOPSIS
.B prokka-genpept_to_fasta_db
[\fIoptions\fR] [\fIgenome1.gbp \fR...] \fI> proteins.faa\fR
.SH DESCRIPTION
.TP
\fB\-\-help\fR
This help.
.TP
\fB\-\-verbose\fR!
Verbose progress (default '0').
.TP
\fB\-\-format\fR=\fIs\fR
Input format (default 'genbank').
.TP
\fB\-\-sep\fR=\fIs\fR
Separator between EC/gene/product (default '~~~').
.TP
\fB\-\-blank\fR=\fIs\fR
Replace empty EC/gene/product with this (default '').
.TP
\fB\-\-pseudo\fR!
Include \fI/pseudo\fP genes (default '0').
.TP
\fB\-\-hypo\fR!
Include 'hypothetical protein' genes (default '0').
.TP
\fB\-\-minlen\fR=\fIi\fR
Minimum peptide length (default '0').