.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.15.
.TH CLUSTERSETS.PY "1" "May 2020" "ClusterSets.py 0.6.0" "User Commands"
.SH NAME
ClusterSets.py \- Cluster sequences by group
.SH DESCRIPTION
usage: ClusterSets.py [\-\-version] [\-h]  ...
.PP
Cluster sequences by group
.SS "help:"
.TP
\fB\-\-version\fR
show program's version number and exit
.TP
\fB\-h\fR, \fB\-\-help\fR
show this help message and exit
.SS "subcommands:"
.IP
Clustering method
.TP
set
Cluster sequences within annotation sets.
.TP
all
Cluster all sequences regardless of annotation.
.TP
barcode
Cluster reads by clustering barcode sequences.
.SS "output files:"
.IP
cluster\-pass
.IP
clustered reads.
.IP
cluster\-fail
.IP
raw reads failing clustering.
.SS "output annotation fields:"
.IP
CLUSTER
.IP
a numeric cluster identifier defining the within\-group cluster.
.SH AUTHOR
 This manpage was written by Andreas Tille for the Debian distribution and
 can be used for any other usage of the program.