.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.16.
.TH POLISH_CLUSTERS "1" "September 2020" "polish_clusters 0.1.0+ds" "User Commands"
.SH NAME
polish_clusters \- Collection of tools to annotate genomes using long read transcriptomics data
.SH DESCRIPTION
.SS "Usage of polish_clusters:"
.TP
\fB\-V\fR
Print out version.
.HP
\fB\-a\fR string
.IP
Read cluster memberships in tabular format.
.HP
\fB\-c\fR int
.IP
Minimum cluster size. (default 1)
.HP
\fB\-d\fR string
.IP
Location of temporary directory.
.TP
\fB\-h\fR
Print out help message.
.TP
\fB\-m\fR
Do not load all reads in memory (slower).
.HP
\fB\-o\fR string
.IP
Output fasta file.
.HP
\fB\-t\fR int
.IP
Number of cores to use. (default 4)
.HP
\fB\-x\fR string
.IP
Arguments passed to minimap2.
.HP
\fB\-y\fR string
.IP
Arguments passed to racon.
.SH AUTHOR
 This manpage was written by Nilesh Patra for the Debian distribution and
 can be used for any other usage of the program.