.TH MODFREQS "1" "May 2016" "modFreqs 1.4" "User Commands" .SH NAME modFreqs \- Change background frequencies of reversible tree model in such .SH DESCRIPTION Change background frequencies of reversible tree model in such a way that reversibility is maintained. .SH SYNOPSIS .B modFreqs tree.mod > new.mod .IP OR .PP .B modFreqs tree.mod > new.mod .SH OPTIONS .HP \fB\-\-help\fR, \fB\-h\fR .IP Print this help message.