.\" Automatically generated by Pod::Man 4.11 (Pod::Simple 3.35) .\" .\" Standard preamble: .\" ======================================================================== .de Sp \" Vertical space (when we can't use .PP) .if t .sp .5v .if n .sp .. .de Vb \" Begin verbatim text .ft CW .nf .ne \\$1 .. .de Ve \" End verbatim text .ft R .fi .. .\" Set up some character translations and predefined strings. \*(-- will .\" give an unbreakable dash, \*(PI will give pi, \*(L" will give a left .\" double quote, and \*(R" will give a right double quote. \*(C+ will .\" give a nicer C++. Capital omega is used to do unbreakable dashes and .\" therefore won't be available. \*(C` and \*(C' expand to `' in nroff, .\" nothing in troff, for use with C<>. .tr \(*W- .ds C+ C\v'-.1v'\h'-1p'\s-2+\h'-1p'+\s0\v'.1v'\h'-1p' .ie n \{\ . ds -- \(*W- . ds PI pi . if (\n(.H=4u)&(1m=24u) .ds -- \(*W\h'-12u'\(*W\h'-12u'-\" diablo 10 pitch . if (\n(.H=4u)&(1m=20u) .ds -- \(*W\h'-12u'\(*W\h'-8u'-\" diablo 12 pitch . ds L" "" . ds R" "" . ds C` "" . ds C' "" 'br\} .el\{\ . ds -- \|\(em\| . ds PI \(*p . ds L" `` . ds R" '' . ds C` . ds C' 'br\} .\" .\" Escape single quotes in literal strings from groff's Unicode transform. .ie \n(.g .ds Aq \(aq .el .ds Aq ' .\" .\" If the F register is >0, we'll generate index entries on stderr for .\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index .\" entries marked with X<> in POD. Of course, you'll have to process the .\" output yourself in some meaningful fashion. .\" .\" Avoid warning from groff about undefined register 'F'. .de IX .. .nr rF 0 .if \n(.g .if rF .nr rF 1 .if (\n(rF:(\n(.g==0)) \{\ . if \nF \{\ . de IX . tm Index:\\$1\t\\n%\t"\\$2" .. . if !\nF==2 \{\ . nr % 0 . nr F 2 . \} . \} .\} .rr rF .\" ======================================================================== .\" .IX Title "Bio::DescribableI 3pm" .TH Bio::DescribableI 3pm "2020-10-28" "perl v5.30.3" "User Contributed Perl Documentation" .\" For nroff, turn off justification. Always turn off hyphenation; it makes .\" way too many mistakes in technical documents. .if n .ad l .nh .SH "NAME" Bio::DescribableI \- interface for objects with human readable names and descriptions .SH "SYNOPSIS" .IX Header "SYNOPSIS" .Vb 1 \& # to test this is a describable object \& \& $obj\->isa("Bio::DescribableI") || \& $obj\->throw("$obj does not implement the Bio::DescribableI interface"); \& \& # accessors \& \& $name = $obj\->display_name(); \& $desc = $obj\->description(); .Ve .SH "DESCRIPTION" .IX Header "DESCRIPTION" This interface describes methods expected on describable objects, ie ones which have human displayable names and descriptions .SH "FEEDBACK" .IX Header "FEEDBACK" .SS "Mailing Lists" .IX Subsection "Mailing Lists" User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated. .PP .Vb 2 \& bioperl\-l@bioperl.org \- General discussion \& http://bioperl.org/wiki/Mailing_lists \- About the mailing lists .Ve .SS "Support" .IX Subsection "Support" Please direct usage questions or support issues to the mailing list: .PP \&\fIbioperl\-l@bioperl.org\fR .PP rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible. .SS "Reporting Bugs" .IX Subsection "Reporting Bugs" Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web: .PP .Vb 1 \& https://github.com/bioperl/bioperl\-live/issues .Ve .SH "AUTHOR \- Ewan Birney" .IX Header "AUTHOR - Ewan Birney" Email birney@sanger.ac.uk .SH "Implementation Specific Functions" .IX Header "Implementation Specific Functions" These functions are the ones that a specific implementation must define. .SS "display_name" .IX Subsection "display_name" .Vb 9 \& Title : display_name \& Usage : $string = $obj\->display_name() \& Function: A string which is what should be displayed to the user \& the string should have no spaces (ideally, though a cautious \& user of this interface would not assume this) and should be \& less than thirty characters (though again, double checking \& this is a good idea) \& Returns : A scalar \& Status : Virtual .Ve .SS "description" .IX Subsection "description" .Vb 10 \& Title : description \& Usage : $string = $obj\->description() \& Function: A text string suitable for displaying to the user a \& description. This string is likely to have spaces, but \& should not have any newlines or formatting \- just plain \& text. The string should not be greater than 255 characters \& and clients can feel justified at truncating strings at 255 \& characters for the purposes of display \& Returns : A scalar \& Status : Virtual .Ve