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.IX Title "Bio::DB::SeqFeature::Store::berkeleydb3 3pm"
.TH Bio::DB::SeqFeature::Store::berkeleydb3 3pm "2020-01-13" "perl v5.30.0" "User Contributed Perl Documentation"
.\" For nroff, turn off justification.  Always turn off hyphenation; it makes
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.SH "NAME"
Bio::DB::SeqFeature::Store::berkeleydb3 \-\- Storage and retrieval of sequence
annotation data in Berkeleydb files
.SH "SYNOPSIS"
.IX Header "SYNOPSIS"
.Vb 4
\&  # Create a feature database from scratch
\&  $db     = Bio::DB::SeqFeature::Store\->new( \-adaptor => \*(Aqberkeleydb\*(Aq,
\&                                             \-dsn     => \*(Aq/var/databases/fly4.3\*(Aq,
\&                                             \-create  => 1);
\&
\&  # get a feature from somewhere
\&  my $feature = Bio::SeqFeature::Generic\->new(...);
\&
\&  # store it
\&  $db\->store($feature) or die "Couldn\*(Aqt store!";
.Ve
.SH "DESCRIPTION"
.IX Header "DESCRIPTION"
This is a faster version of the berkeleydb storage adaptor for
Bio::DB::SeqFeature::Store. It is used automatically when you create a
new database with the original berkeleydb adaptor. When opening a
database created under the original adaptor, the old code is used for
backward compatibility.
.PP
Please see Bio::DB::SeqFeature::Store::berkeleydb for full usage
instructions.
.SH "BUGS"
.IX Header "BUGS"
This is an early version, so there are certainly some bugs. Please
use the BioPerl bug tracking system to report bugs.
.SH "SEE ALSO"
.IX Header "SEE ALSO"
bioperl,
Bio::DB::SeqFeature,
Bio::DB::SeqFeature::Store,
Bio::DB::SeqFeature::GFF3Loader,
Bio::DB::SeqFeature::Segment,
Bio::DB::SeqFeature::Store::memory,
Bio::DB::SeqFeature::Store::DBI::mysql,
.SH "AUTHOR"
.IX Header "AUTHOR"
Lincoln Stein <lincoln.stein@gmail.com>.
.PP
Copyright (c) 2009 Ontario Institute for Cancer Research
.PP
This library is free software; you can redistribute it and/or modify
it under the same terms as Perl itself.