.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.12.
.TH FQ2FA "1" "March 2020" "fq2fa 1.1.3" "User Commands"
.SH NAME
fq2fa \- Convert Fastq sequences to Fasta sequences.
.SH SYNOPSIS
.B fq2fa
\fI\,tmp.fq tmp.fa \/\fR[...]
.SH DESCRIPTION
fq2fa \- Convert Fastq sequences to Fasta sequences.
.IP
fq2fa \fB\-\-paired\fR tmp.fq tmp.fa
fq2fa \fB\-\-merge\fR tmp_1.fq tmp_2.fq tmp.fa
.SS "Allowed Options:"
.TP
\fB\-\-paired\fR
if the reads are paired\-end in one file
.TP
\fB\-\-merge\fR
if the reads are paired\-end in two files
.TP
\fB\-\-filter\fR
filter out reads containing 'N'
.SH AUTHOR
 This manpage was written by Andreas Tille for the Debian distribution and
 can be used for any other usage of the program.