.\" Man page generated from reStructuredText. . .TH "GMX-SIGEPS" "1" "Mar 29, 2021" "2020.6-Debian-2020.6-2" "GROMACS" .SH NAME gmx-sigeps \- Convert c6/12 or c6/cn combinations to and from sigma/epsilon . .nr rst2man-indent-level 0 . .de1 rstReportMargin \\$1 \\n[an-margin] level \\n[rst2man-indent-level] level margin: \\n[rst2man-indent\\n[rst2man-indent-level]] - \\n[rst2man-indent0] \\n[rst2man-indent1] \\n[rst2man-indent2] .. .de1 INDENT .\" .rstReportMargin pre: . RS \\$1 . nr rst2man-indent\\n[rst2man-indent-level] \\n[an-margin] . nr rst2man-indent-level +1 .\" .rstReportMargin post: .. .de UNINDENT . RE .\" indent \\n[an-margin] .\" old: \\n[rst2man-indent\\n[rst2man-indent-level]] .nr rst2man-indent-level -1 .\" new: \\n[rst2man-indent\\n[rst2man-indent-level]] .in \\n[rst2man-indent\\n[rst2man-indent-level]]u .. .SH SYNOPSIS .INDENT 0.0 .INDENT 3.5 .sp .nf .ft C gmx sigeps [\fB\-o\fP \fI[<.xvg>]\fP] [\fB\-[no]w\fP] [\fB\-xvg\fP \fI\fP] [\fB\-c6\fP \fI\fP] [\fB\-cn\fP \fI\fP] [\fB\-pow\fP \fI\fP] [\fB\-sig\fP \fI\fP] [\fB\-eps\fP \fI\fP] [\fB\-A\fP \fI\fP] [\fB\-B\fP \fI\fP] [\fB\-C\fP \fI\fP] [\fB\-qi\fP \fI\fP] [\fB\-qj\fP \fI\fP] [\fB\-sigfac\fP \fI\fP] .ft P .fi .UNINDENT .UNINDENT .SH DESCRIPTION .sp \fBgmx sigeps\fP is a simple utility that converts C6/C12 or C6/Cn combinations to sigma and epsilon, or vice versa. It can also plot the potential in file. In addition, it makes an approximation of a Buckingham potential to a Lennard\-Jones potential. .SH OPTIONS .sp Options to specify output files: .INDENT 0.0 .TP .B \fB\-o\fP [<.xvg>] (potje.xvg) xvgr/xmgr file .UNINDENT .sp Other options: .INDENT 0.0 .TP .B \fB\-[no]w\fP (no) View output \&.xvg, \&.xpm, \&.eps and \&.pdb files .TP .B \fB\-xvg\fP (xmgrace) xvg plot formatting: xmgrace, xmgr, none .TP .B \fB\-c6\fP (0.001) C6 .TP .B \fB\-cn\fP (1e\-06) Constant for repulsion .TP .B \fB\-pow\fP (12) Power of the repulsion term .TP .B \fB\-sig\fP (0.3) sigma .TP .B \fB\-eps\fP (1) epsilon .TP .B \fB\-A\fP (100000) Buckingham A .TP .B \fB\-B\fP (32) Buckingham B .TP .B \fB\-C\fP (0.001) Buckingham C .TP .B \fB\-qi\fP (0) qi .TP .B \fB\-qj\fP (0) qj .TP .B \fB\-sigfac\fP (0.7) Factor in front of sigma for starting the plot .UNINDENT .SH SEE ALSO .sp \fBgmx(1)\fP .sp More information about GROMACS is available at <\fI\%http://www.gromacs.org/\fP>. .SH COPYRIGHT 2021, GROMACS development team .\" Generated by docutils manpage writer. .