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CSB-EMBD(1) User Commands CSB-EMBD(1)


csb-embd - Sharpening of EM maps by non-negative blind deconvolution


usage: csb-embd [-h] [-s PSF_SIZE] [-o OUTPUT] [-i ITERATIONS]

[-f OUTPUT_FREQUENCY] [-v] mapfile

Sharpening of EM maps by non-negative blind deconvolution. For details see: Hirsch M, Schoelkopf B and Habeck M (2010) A New Algorithm for Improving the Resolution of Cryo-EM Density Maps.

positional arguments:

Input Cryo EM file in CCP4 MRC format

optional arguments:

show this help message and exit
size of the point spread function (default=15)
output directory of the sharpened maps (default=.)
number of iterations (default=1000)
create a map file each f iterations (default=50)
verbose mode (default=False)


This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

November 2017 csb-embd 1.2.5