NAME¶

cif_select - read CIFs and print out selected tags with their values.

SYNOPSIS¶

cif_select --options input1.cif input*.cif

DESCRIPTION¶

Read CIFs and print out selected tags with their values.

OPTIONS¶

-t, --tags _tag1,_tag2,_tag3

--tags "_tag1 _tag2 _tag3"
Print out values of tags _tag1, _tag2, and _tag3;
the specified tag list becomes a new list of printed tags.

-a, --add-tag _tag4
Add tag _tag4 to the list of printed tags.

-f, --file-with-tags tag.lst
Read tags to be extracted from the file 'tag.lst'.
Comments (lines starting with '#') in 'tag.lst' are
ignored.

-c, --clear-tags
Clear the list of printed data items accumulated so far.

--invert
Invert the sense of selection. Exclude values of
the data items from the supplied list.

--treat-dots-as-underscores
Convert all dots in data names into underscores.

--dont-treat-dots-as-underscores, --no-treat-dots-as-underscores
Leave original data names as they are (default).

--tabular, --output-tabular
Output selected data names and their values in tabular
format.

--cif, --output-cif
Output selected data names and their values in CIF
format (default).

--one-data-item-per-row
Print values of each of the data items in its own line (row)
in tabular format (default with --output-tabular):
<data block name> <data name> <value> <value> ... <value>

--one-data-item-per-column
Print values of each of the data items in its own column
in tabular format (requires --output-tabular):
<data block name> <data block name> ...
<data name> <data name> ...
<value> <value> ...

--canonicalize-tag-names
Output data names in the canonical form.

--dont-canonicalize-tag-names, --no-canonicalize-tag-names
Output data names as they are given in original file(s)
(default).

--use-c-parser
Use Perl & C parser for CIF parsing (default).

--use-perl-parser
Use Perl parser for CIF parsing.

--help, --usage
Output a short usage message (this message) and exit.

--version
Output version information and exit.

REPORTING BUGS¶

Report cif_select bugs using e-mail: cod-bugs@ibt.lt