.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.6.
.TH CONVERT_VCF_TO_FEATURES "1" "August 2018" "convert_vcf_to_features 20170919" "User Commands"
.SH NAME
convert_vcf_to_features \- visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences
.SH DESCRIPTION
Unknown option: help
1
.SS "USAGE:"
.IP
convert_vcf_to_features \fB\-i\fR INFILE \fB\-o\fR OUTFILE
.SS "DESCRIPTION:"
.IP
This script converts a VCF (Variant Call Format) file into a feature file
(GFF). The resulting GFF file can be used by the CGview Comparison tool.
Simply place the GFF file in the 'features' directory of a CCT project.
.SS "REQUIRED ARGUMENTS:"
.HP
\fB\-i\fR, \fB\-\-input\fR FILE
.IP
Input VCF file (tab deliminated).
.HP
\fB\-o\fR, \fB\-\-output\fR FILE
.IP
Name to call the output file.
.SS "EXAMPLE:"
.IP
convert_vcf_to_features \fB\-i\fR input.vcf \fB\-o\fR output.gff
.SH AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.