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BP_EXTRACT_FEATURE_SEQ(1p) User Contributed Perl Documentation BP_EXTRACT_FEATURE_SEQ(1p)


bp_extract_feature_seq - extract the corresponding sequence for a specified feature type


bp_extract_feature_seq [--format FORMAT] [--feature CDS] [--output FILE] [--input] FILE


This script will extract the sequence for all the features you specify.


Specifies the sequence file to be read.
Format of the file specified by --input. If not given, it will try to guess the correct format from the file extension.
Feature to be extracted. By default, it extracts the CDS feature.
File where the extracted features will be saved. If not specified, STDOUT is used.


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 Jason Stajich <jason-at-bioperl-dot-org>
2020-10-28 perl v5.30.3