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Bio::Tradis::Parser::Fastq(3pm) User Contributed Perl Documentation Bio::Tradis::Parser::Fastq(3pm)

NAME

Bio::Tradis::Parser::Fastq - Basic FastQ parser.

VERSION

version 1.4.5

SYNOPSIS

Parses fastq files.

   use Bio::Tradis::Parser::Fastq;
   
   my $pipeline = Bio::Tradis::Parser::Fastq->new(file => 'abc');
   $pipeline->next_read;
   $pipeline->read_info;

=next_read Moves to the next read. Returns 1 if read exists, returns 0 if EOF

=read_info Returns an array of info for the read in an array. 0 = id 1 = sequence 2 = quality string

AUTHOR

Carla Cummins <path-help@sanger.ac.uk>

COPYRIGHT AND LICENSE

This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.

This is free software, licensed under:

  The GNU General Public License, Version 3, June 2007
2020-01-11 perl v5.30.0