.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.13.
.TH PXTCOMB "1" "July 2021" "pxtcomb 1.3" "User Commands"
.SH NAME
pxtcomb \- manual page for pxtcomb 1.3
.SH SYNOPSIS
.B pxtcomb
[\fI\,OPTIONS\/\fR]... \fI\,FILE\/\fR
.SH DESCRIPTION
Combine a set of trees from one file into a tree from another.
Pass in 2 trees with `t` and `a`.
.SH OPTIONS
.TP
\fB\-t\fR, \fB\-\-treef\fR=\fI\,FILE\/\fR
reference treefile, STDIN otherwise
.TP
\fB\-a\fR, \fB\-\-addtree\fR=\fI\,FILE\/\fR
alternate treefile
.TP
\fB\-o\fR, \fB\-\-outf\fR=\fI\,FILE\/\fR
output file, STOUT otherwise
.TP
\fB\-h\fR, \fB\-\-help\fR
display this help and exit
.TP
\fB\-V\fR, \fB\-\-version\fR
display version and exit
.TP
\fB\-C\fR, \fB\-\-citation\fR
display phyx citation and exit
.SH CITATION
Brown, Joseph W., Joseph F. Walker, and Stephen A. Smith. 2017. Phyx: phylogenetic tools for unix. Bioinformatics 33(12): 1886-1888. https://doi.org/10.1093/bioinformatics/btx063.
.SH AUTHOR
Written by Stephen A. Smith (blackrim)
.SH "REPORTING BUGS"
Report bugs to: <https://github.com/FePhyFoFum/phyx/issues>
phyx home page: <https://github.com/FePhyFoFum/phyx>
.SH COPYRIGHT
Copyright \(co 2017\-2021 FePhyFoFum
License GPLv3