.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.44.1.
.TH PROKKA-CLUSTERS_TO_HMM "1" "February 2015" "prokka-clusters_to_hmm 1.11" "User Commands"
.SH NAME
prokka-clusters_to_hmm \- rapid annotation of prokaryotic genomes
.SH SYNOPSIS
.B prokka-clusters_to_hmm
[\fIoptions\fR]
.SH DESCRIPTION
.TP
\fB\-\-help\fR
This help.
.TP
\fB\-\-verbose\fR!
Verbose output (default '0').
.TP
\fB\-\-dir\fR=\fIs\fR
Source CLUSTERS folder (default '/bio/data/CLUSTERS/latest').
.TP
\fB\-\-lib\fR=\fIs\fR
Library: PHA PRK ... (default '').
.TP
\fB\-\-outdir\fR=\fIs\fR
Output folder for .hmm files and indices (default '.').